with thanks to David Sasaki for this list
Manso Boutique Hotel
will pick up at GYE, and are happy to accept pets, many of staff speak some english Free WiFi
http://manso.ec/?lang=en
Perla Real Inn
http://www.perlarealinn.com/
Hotel Jeshua
http://hoteljeshua.com/
NucaPacha Hostel
http://www.nucapacha.com/
Hotel Garzota Inn
http://www.hotelgarzotainn.com/index2.html
Hotel Livingston Inn
https://www.facebook.com/hotelivingston
Courtyard by Marriott
http://www.marriott.com/hotels/travel/gyecy-courtyard-guayaquil/
Funky Monkey Hostal
http://www.funkymonkeyhostal.com/
Airport Hotel
Ave. De Las Americas and Calle A (across from the Guayaquil Airport)
Holiday Inn Guayaquil Airport
http://www.ihg.com/holidayinn/hotels/us/en/guayaquil/gyeap/hoteldetail
Hotel Garzota Inn
http://www.hotelgarzotainn.com/index2.html
Hotel Oro Verde
http://www.oroverdehotels.com/gye/
Hotel 9 de Octubre
https://www.facebook.com/pages/Hotel-9-de-Octubre/392590880833557
Murali Hostal
http://guayaquilairporthotel.com/airport-hotel-guayaquil/
Hotel Palace
http://www.hotelpalaceguayaquil.com.ec/default-en.html
Sheraton Guayaquil Hotel
http://www.starwoodhotels.com/sheraton/property/overview/index.html?propertyID=1159
Casa Romero
http://www.hostelromero.com/en